Structure of PDB 5lly Chain B

Receptor sequence
>5llyB (length=490) Species: 1036674 (Idiomarina sp. A28L) [Search protein sequence]
DISKLIAACDQEPIHIPNAIQPFGAMLIVEKDTQQIVYASANSAEYFSVA
DNTIHELSDIKQANINSLLPEHLISGLASAIRENEPIWVETDRLSFLGWR
HENYYIIEVERYHVQTSNWFEIQFQRAFQKLRNCKTHNDLINTLTRLIQE
ISGYDRVMIYQFDPEWNGRVIAESVRQLFTSMLNHHFPASDIPAQARAMY
SINPIRIIPDVNAEPQPLHMIHKPQNTEAVNLSSGVLRAVSPLHMQYLRN
FGVSASTSIGIFNEDELWGIVACHHTKPRAIGRRIRRLLVRTVEFAAERL
WLIHSRNVERYMVTVQAAREQLSTTADDKHSSHEIVIEHAADWCKLFRCD
GIGYLRGEELTTYGETPDQTTINKLVEWLEENSLFWHSHMLPDGSRFLLA
IPLKSFSYLLLFRVAQNEVRTWAGKPEKLSVETSTGTMLGPRKSFEAWQD
EVSGKSQPWRTAQLYAARDIARDLLIVADSMQLNLLNDQL
3D structure
PDB5lly Long-range allosteric signaling in red light-regulated diguanylyl cyclases.
ChainB
Resolution2.4 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.7.7.65: diguanylate cyclase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 LBV B C17 Y168 F195 S198 D199 I200 P201 A204 R214 H252 Y255 S264 S266 H282 L464 P466 C9 Y160 F187 S190 D191 I192 P193 A196 R206 H244 Y247 S256 S258 H274 L439 P441
Gene Ontology
Biological Process
GO:0006355 regulation of DNA-templated transcription
GO:0009584 detection of visible light

View graph for
Biological Process
External links
PDB RCSB:5lly, PDBe:5lly, PDBj:5lly
PDBsum5lly
PubMed28275738
UniProtF7RW09

[Back to BioLiP]