Structure of PDB 5ldt Chain B

Receptor sequence
>5ldtB (length=403) Species: 197 (Campylobacter jejuni) [Search protein sequence]
TPLEEAIKDVDVSGVLRYRYDTGNFDKNFLNNSNLNNSKQDHKYRAQVNF
SAAIADNFKAFVQFDYNAVDGGTGVDNATNAEKGLFVRQLYLTYTNEDVA
TSVIAGKQQLNIIWTDNGVDGLVGTGVKVVNNSIDGLTLAAFAVDSFMAA
EQGSDLLGQSTYVGNGKNNNDSFKLDSIGNLYGAAAVGSYDLAGGQFNPQ
LWLAYWDQVAFFYAVDAAYSTTIGINWTLEGAYLGNSLDSELDDKKTYAN
GNLFALKGSIEVNGWDASLGGLYYGDKEKASTVVIEDQGNLGSLLAGEEI
FYTTGSRLNGDTGRNIFGYVTGGYTFNETVRVGADFVYGGTKTEATTHLG
GGKKLEAVARVDYKYSPKLNFSAFYSYVNLDQGVNTNESADHSTVRLQAL
YKF
3D structure
PDB5ldt MOMP from Campylobacter jejuni Is a Trimer of 18-Stranded beta-Barrel Monomers with a Ca(2+) Ion Bound at the Constriction Zone.
ChainB
Resolution2.88 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA B G72 N77 G72 N77
BS02 C8E B Y18 H42 Y18 H42
BS03 CA B D120 Q152 D155 E288 D120 Q152 D155 E286
BS04 CA B D145 N180 D145 N180
BS05 C8E B A105 G106 G126 V127 D145 N180 A105 G106 G126 V127 D145 N180
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:5ldt, PDBe:5ldt, PDBj:5ldt
PDBsum5ldt
PubMed27693650
UniProtQ659I5

[Back to BioLiP]