Structure of PDB 5lde Chain B

Receptor sequence
>5ldeB (length=225) Species: 1320,868565 [Search protein sequence]
QYKLILGETTTEAVDAATAEKVFKQYANDNGVDGEWTYTKTFTVELEVLG
PLDPNSMATYEVLCEVARKLGTDDREVVLFLLNVFIPQPTLAQLIGALRA
LKEEGRLTFPLLAECLFRAGRRDLLRDLLHLDPRFLERHLAGTMSYFSPY
QLTVLHVDGELCARDIRSLIFLSKDTITPQTFLHWVYCMENLDLLGPTDV
DALMSMLRSLSRVDLQRQVQTLMGL
3D structure
PDB5lde IKK gamma-Mimetic Peptides Block the Resistance to Apoptosis Associated with Kaposi's Sarcoma-Associated Herpesvirus Infection.
ChainB
Resolution3.38 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B P154 A157 L173 H174 L175 D176 F179 H183 Y190 P110 A113 L129 H130 L131 D132 F135 H139 Y146
Gene Ontology
Biological Process
GO:0006915 apoptotic process
GO:0042981 regulation of apoptotic process
GO:0052150 symbiont-mediated perturbation of host apoptosis
GO:0085033 symbiont-mediated activation of host NF-kappaB cascade
Cellular Component
GO:0005618 cell wall

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Biological Process
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Cellular Component
External links
PDB RCSB:5lde, PDBe:5lde, PDBj:5lde
PDBsum5lde
PubMed28931678
UniProtF5HEZ4;
P19909|SPG2_STRSG Immunoglobulin G-binding protein G (Gene Name=spg)

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