Structure of PDB 5kkh Chain B

Receptor sequence
>5kkhB (length=228) Species: 362976 (Haloquadratum walsbyi DSM 16790) [Search protein sequence]
LGVEGEGIWLALGTIGMLLGMLYFIADGLDVQDPRQKEFYVITILIPAIA
AASYLSMFFGFGLTEVSLANGRVVDVYWARYADWLFTTPLLLLDIGLLAG
ASQRDIGALVGIDAFMIVTGLVATLTKVVVARYAFWTISTISMVFLLYYL
VAVFGEAVSDADEDTRSTFNALRNIILVTWAIYPVAWLVGTEGLALTGLY
GETLLFMVLDLVAKVGFGFILLRSRAIM
3D structure
PDB5kkh A Versatile System for High-Throughput In Situ X-ray Screening and Data Collection of Soluble and Membrane-Protein Crystals.
ChainB
Resolution2.125 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 RET B W94 T98 M126 S149 T150 M153 W190 Y193 P194 K224 W84 T88 M116 S139 T140 M143 W180 Y183 P184 K214
Gene Ontology
Molecular Function
GO:0005216 monoatomic ion channel activity
GO:0009881 photoreceptor activity
Biological Process
GO:0006811 monoatomic ion transport
GO:0007602 phototransduction
GO:1902600 proton transmembrane transport
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:5kkh, PDBe:5kkh, PDBj:5kkh
PDBsum5kkh
PubMed28261000
UniProtQ18DH8|BACR1_HALWD Bacteriorhodopsin-I (Gene Name=bop1)

[Back to BioLiP]