Structure of PDB 5k1l Chain B

Receptor sequence
>5k1lB (length=137) Species: 129555 (Amphitrite ornata) [Search protein sequence]
GFKQDIATLRGDLRTYAQDIFLAFLNKYPDEKRNFKNYVGKSDQELKSMA
KFGDHTEKVFNLMMEVADRATDCVPLASDASTLVQMKQHSGLTTGNFEKL
FVALVEYMRASGQSFDSQSWDRFGKNLVSALSSAGMK
3D structure
PDB5k1l Dehaloperoxidase B from Amphitrite ornata: benzimidazole complex
ChainB
Resolution1.08 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 HEM B F35 H55 V59 M63 M86 Q88 H89 L92 N96 F97 F35 H55 V59 M63 M86 Q88 H89 L92 N96 F97
BS02 BZI B F21 V59 L100 F21 V59 L100 BindingDB: Kd=1.10e+5nM
Gene Ontology
Molecular Function
GO:0004601 peroxidase activity
GO:0005344 oxygen carrier activity
GO:0019825 oxygen binding
GO:0020037 heme binding
GO:0046872 metal ion binding
Biological Process
GO:0015671 oxygen transport
GO:0098869 cellular oxidant detoxification

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Molecular Function
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Biological Process
External links
PDB RCSB:5k1l, PDBe:5k1l, PDBj:5k1l
PDBsum5k1l
PubMed
UniProtQ9NAV7

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