Structure of PDB 5iop Chain B

Receptor sequence

>5iopB (length=215) Species: 10090 (Mus musculus) [Search protein sequence]

QVQLKQSGPGLVQPSQSLSITCTVSGFSLTNYGVHWVRQSPGKGLEWLGV
IWSGGNTDYNTPFTSRLSINKDNSKSQVFFKMNSLQSNDTAIYYCARALT
YYDYEFAYWGQGTLVTVSAASTKGPSVFPLAPSGGTAALGCLVKDYFPEP
VTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVN
HKPSNTKVDKRVEPK

3D structure

PDB

5iop Natural and non-natural amino-acid side-chain substitutions: affinity and diffraction studies of meditope-Fab complexes.

Chain

Resolution

2.499 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	B	Q39 S40 P41 I92 Y94 P173	Q39 S40 P41 I92 Y94 P168

External links

PDB	RCSB:5iop, PDBe:5iop, PDBj:5iop
PDBsum	5iop
PubMed	27834791

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