Structure of PDB 5ifj Chain B

Receptor sequence

>5ifjB (length=213) Species: 9606 (Homo sapiens) [Search protein sequence]

QLVLTQSPSASASLGASVRLTCTLSSGHSSYVIAWHQQQSEKGPRYLMKV
NSDGSHSKGDGIPDRFSGSSSGAERYLTISSLQSEDEADYYCQTWGAGIL
VFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVT
VAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQV
THEGSTVEKTVAP

3D structure

PDB

5ifj Stereotyped antibody responses target posttranslationally modified gluten in celiac disease.

Chain

Resolution

2.35 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	B	G28 Y37 V38 W107 G108 A109 G114	G27 Y31 V32 W95 G96 A97 G98

External links

PDB	RCSB:5ifj, PDBe:5ifj, PDBj:5ifj
PDBsum	5ifj
PubMed	28878138

[Back to BioLiP]