Structure of PDB 5i8c Chain B

Receptor sequence

>5i8cB (length=212) Species: 9606 (Homo sapiens) [Search protein sequence]

DIQLTQSPSFLSASVGDKVTITCRASQGVRNELAWYQQKPGKAPNLLIYY
ASTLQSGVPSRFSATGSGTHFTLTVSSLQPEDFATYFCQHMSSYPLTFGG
GTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKV
DNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQG
LSSPVTKSFNRG

3D structure

PDB

5i8c Fusion peptide of HIV-1 as a site of vulnerability to neutralizing antibody.

Chain

Resolution

1.54 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	B	E32 M91 S93 Y94	E32 M91 S93 Y94

External links

PDB	RCSB:5i8c, PDBe:5i8c, PDBj:5i8c
PDBsum	5i8c
PubMed	27174988

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