Structure of PDB 5ho9 Chain B

Receptor sequence
>5ho9B (length=596) Species: 1422 (Geobacillus stearothermophilus) [Search protein sequence]
KDPQFTNVSVHDPSIVKDGDTYYIFGSHIEAAKSKDLMNWEKFTNGYTTP
NNKLYGDLSKNLAGSFKWAGENDADSKGGFAVWAPDVFWNKDYVNEDGTK
GAYMIYYSVSSTYIRSAIGYAVSKHIEGPYKYVDTIVYSGFTKEEAYDAN
SKINKKWTNTNIPKLIEQGKLKGVRADWFHNDGSYNNRDFPNAIDPNLFY
DEKGNLWMAYGSWSGGIFVLPMDKTTGKPIYPGKDGKTPDGRLVDRYFGI
KIAGGYYQSGEGTYIVYDKNTDYYYLYVTYGWLGADGGYNMRQFRSTSPT
GPYVDAKGQSAVLPGEVDNSPYGNKIMGNFLFERKVGDPGTGIGVGYVSP
GHNSVYLDRKTGQQFLVFHTRFPQSGEYHEVRVHQMFMNKNGWPVVAPYR
YAGEKLEKVNKQDVVGEYQLINHGKDYSADIKKQIFVRLNRNNTISGDAT
GTWRKIGHNQAEITIDGETYDGVFVRQWDPTSKRYVMAFTALSNEGVSIW
GSKLADKTDEEIVEDVASDLDLGDTDHVVSNLHLPTEGTRHTVISWTTSD
AKVVSETGVVHRPEVGSAPVTATLTATITKGDATATKVFHITVLPY
3D structure
PDB5ho9 Structure of truncated AbnA (domains 1-3), a GH43 arabinanase from Geobacilllus stearothermophilus, in complex with arabinooctaose
ChainB
Resolution2.845 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 AHR B H570 L637 H527 L594
BS02 AHR B Y156 N230 Y300 Y113 N187 Y257
BS03 AHR B W256 W325 W213 W282
BS04 AHR B H54 D55 S70 W126 H11 D12 S27 W83
BS05 AHR B H54 H71 H422 H11 H28 H379
BS06 AHR B E73 H422 E30 H379
Gene Ontology
Molecular Function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
Biological Process
GO:0005975 carbohydrate metabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5ho9, PDBe:5ho9, PDBj:5ho9
PDBsum5ho9
PubMed
UniProtB3EYN2

[Back to BioLiP]