Structure of PDB 5hfk Chain B

Receptor sequence
>5hfkB (length=205) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
MIDLYFAPTPNGHKITLFLEEAGLDYRLIKVDLGKGGQFRPEFLLISPNN
KIPAIVDHSPADGGEPLSLFESGAILLYLAEKTGLFLSHETRERAATLQW
LFWQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLEN
SPWLGGENYSIADIACWPWVNAWTRQRIDLAMYPAVKNWHERIRSRPATG
QALLK
3D structure
PDB5hfk Structure and function of YghU, a nu-class glutathione transferase related to YfcG from Escherichia coli.
ChainB
Resolution1.551 Å
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Catalytic site (original residue number in PDB) T9
Catalytic site (residue number reindexed from 1) T9
Enzyme Commision number 1.11.1.-
1.8.4.-
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 GSH B T9 N11 G109 P110 W169 T9 N11 G109 P110 W169
BS02 GSH B T9 N11 Q38 K51 I52 E71 S72 T9 N11 Q38 K51 I52 E71 S72
Gene Ontology
Molecular Function
GO:0004601 peroxidase activity
GO:0015036 disulfide oxidoreductase activity
GO:0042803 protein homodimerization activity
Biological Process
GO:0006979 response to oxidative stress
GO:0098869 cellular oxidant detoxification

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:5hfk, PDBe:5hfk, PDBj:5hfk
PDBsum5hfk
PubMed
UniProtP77526|YFCG_ECOLI Disulfide-bond oxidoreductase YfcG (Gene Name=yfcG)

[Back to BioLiP]