Structure of PDB 5h9d Chain B

Receptor sequence
>5h9dB (length=318) Species: 1280 (Staphylococcus aureus) [Search protein sequence]
AKLNMNNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILS
SQFGKDEQTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKW
DQTTAILTGNFLLALGLEHLMAVKDNRVHQLISESIVDVCRGELFQFQDQ
FNSQQTIINYLRRINRKTALLIQISTEVGAITSQSDKETVRKLKMIGHYI
GMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNPDFKLK
IEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALNLISELPDG
HPKSLLLSLTKKMGSRNT
3D structure
PDB5h9d Structure, Function, and Inhibition of Staphylococcus aureus Heptaprenyl Diphosphate Synthase
ChainB
Resolution2.68 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.5.1.30: heptaprenyl diphosphate synthase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B I159 R163 V283 K286 Y287 K290 I158 R162 V282 K285 Y286 K289
BS02 PO4 B G40 K41 H75 G39 K40 H74
Gene Ontology
Molecular Function
GO:0000010 heptaprenyl diphosphate synthase activity
GO:0004659 prenyltransferase activity
GO:0016740 transferase activity
Biological Process
GO:0008299 isoprenoid biosynthetic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5h9d, PDBe:5h9d, PDBj:5h9d
PDBsum5h9d
PubMed27457559
UniProtQ2FYG6

[Back to BioLiP]