Structure of PDB 5h42 Chain B

Receptor sequence
>5h42B (length=1113) Species: 357809 (Lachnoclostridium phytofermentans ISDg) [Search protein sequence]
GILKTLSAPIILENSNSTFTFLPGGDNFEWIHESIMINAFQGNTLDGSTN
NLYLRIYKDNSLAFYPLIGMNSKSTIKSGTSTLIFEGTAEDISYTVTFRL
TPYGIWFWDISLSGNCNKADIIYSQDIGVGTKGSVNSNELYLAQYLGHSI
FQGDYGYVICSRQNMAQGDLFPYLQQGSLGIRSIAYSTDGTQFFGLSYKK
TNIPEALYGDLPSKNKQYELAHTALQTEAFSLSGTKQFSFYGICKTNHPE
VIREIEYIQELEKAYAYHESGEILPVNVPTLQNIGAPYASSRWDAKQVEH
YFPKRLLEEKEEEALLSFFTPEKSHVVLQDKELTTERPHGHILMTNFDVT
KVPQGVVSSTNYMYGAFNCQFVVGNTTYNKLLSNHRGLLNIQKDSGQRIF
IKIGDCYRQLTLPAAYEMNVAGSTWYYQLDEDVLIITSFAMYNRPEIVLK
VQSLGHKKYDFIVTHQLTVGPNEYENEIKLTREGNILQLSPTDPVVTNHF
YPELSFRMRIPEDCTLSDDSIFFHNNTTINPSLLSIEILQKSSFDIVMQG
FDTGNVIPFLDQYDYKEQLEAYRIYYDQLVCNFKLSAPDKIPLSAEKLNA
IIHWYAHDALIHFASPHGLEQSGGAAWGTRDVCQGPIEFFLTTGHFDLVR
HILITLYSHQIEGGFEWPQWFMFDHYPIHQEDCHGDVVFWPLKAISDYIQ
ATGDTSILNELVDYRTAKDALPTNQPETILIHIKRAVTTIKNRYLSGTAL
ISYAGGDWDDTLQPANSELKENLVSAWTQALAEQTLELLCSAIKGIDHDF
SKELSHMANDIRTSFYQYLIKDGVIAGFLYRESEEHMKYMLHPDDTESSI
HYRLLPLTRSIIAQLADFKLATRNLEIIDEHLACPDGVRLMDHPASYSGG
ISKIFLRAEQAANVGREISLQYVHAHIRYIEALATMGLSKKAWDALMRIN
PILLTDYVPNALTRQSNVYFSSSEGCFDDRYEYAKNFDKLRTGDINVKGG
WRLYSSGPGIYIRRIIADLLGIRFGHNVIHIDPVVTKELDGVTLQFTCFG
KTVFFTYHVDDTMDKHICVKSNNNILPGDNLNNIYRDGGIQIAKDVFLSA
AMSDNNFHIYVKN
3D structure
PDB5h42 Mechanistic insight into the substrate specificity of 1,2-beta-oligoglucan phosphorylase from Lachnoclostridium phytofermentans
ChainB
Resolution2.1 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.4.1.333: 1,2-beta-oligoglucan phosphorylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 G1P B R630 D631 W758 D759 D760 E917 Y922 S1005 R630 D631 W758 D759 D760 E917 Y922 S1005
BS02 G1P B R305 E308 R305 E308
BS03 GLC B R305 L306 R305 L306
Gene Ontology
Molecular Function
GO:0016757 glycosyltransferase activity
GO:0046872 metal ion binding
Biological Process
GO:0005975 carbohydrate metabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5h42, PDBe:5h42, PDBj:5h42
PDBsum5h42
PubMed28198470
UniProtA9KJS6

[Back to BioLiP]