Structure of PDB 5h41 Chain B

Receptor sequence
>5h41B (length=1113) Species: 357809 (Lachnoclostridium phytofermentans ISDg) [Search protein sequence]
GILKTLSAPIILENSNSTFTFLPGGDNFEWIHESIMINAFQGNTLDGSTN
NLYLRIYKDNSLAFYPLIGMNSKSTIKSGTSTLIFEGTAEDISYTVTFRL
TPYGIWFWDISLSGNCNKADIIYSQDIGVGTKGSVNSNELYLAQYLGHSI
FQGDYGYVICSRQNMAQGDLFPYLQQGSLGIRSIAYSTDGTQFFGLSYKK
TNIPEALYGDLPSKNKQYELAHTALQTEAFSLSGTKQFSFYGICKTNHPE
VIREIEYIQELEKAYAYHESGEILPVNVPTLQNIGAPYASSRWDAKQVEH
YFPKRLLEEKEEEALLSFFTPEKSHVVLQDKELTTERPHGHILMTNFDVT
KVPQGVVSSTNYMYGAFNCQFVVGNTTYNKLLSNHRGLLNIQKDSGQRIF
IKIGDCYRQLTLPAAYEMNVAGSTWYYQLDEDVLIITSFAMYNRPEIVLK
VQSLGHKKYDFIVTHQLTVGPNEYENEIKLTREGNILQLSPTDPVVTNHF
YPELSFRMRIPEDCTLSDDSIFFHNNTTINPSLLSIEILQKSSFDIVMQG
FDTGNVIPFLDQYDYKEQLEAYRIYYDQLVCNFKLSAPDKIPLSAEKLNA
IIHWYAHDALIHFASPHGLEQSGGAAWGTRDVCQGPIEFFLTTGHFDLVR
HILITLYSHQIEGGFEWPQWFMFDHYPIHQEDCHGDVVFWPLKAISDYIQ
ATGDTSILNELVDYRTAKDALPTNQPETILIHIKRAVTTIKNRYLSGTAL
ISYAGGDWDDTLQPANSELKENLVSAWTQALAEQTLELLCSAIKGIDHDF
SKELSHMANDIRTSFYQYLIKDGVIAGFLYRESEEHMKYMLHPDDTESSI
HYRLLPLTRSIIAQLADFKLATRNLEIIDEHLACPDGVRLMDHPASYSGG
ISKIFLRAEQAANVGREISLQYVHAHIRYIEALATMGLSKKAWDALMRIN
PILLTDYVPNALTRQSNVYFSSSEGCFDDRYEYAKNFDKLRTGDINVKGG
WRLYSSGPGIYIRRIIADLLGIRFGHNVIHIDPVVTKELDGVTLQFTCFG
KTVFFTYHVDDTMDKHICVKSNNNILPGDNLNNIYRDGGIQIAKDVFLSA
AMSDNNFHIYVKN
3D structure
PDB5h41 Mechanistic insight into the substrate specificity of 1,2-beta-oligoglucan phosphorylase from Lachnoclostridium phytofermentans
ChainB
Resolution2.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.4.1.333: 1,2-beta-oligoglucan phosphorylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GLC B Q621 Y1004 Q621 Y1004
BS02 BGC B Y141 D760 R907 R916 E917 W1001 Y141 D760 R907 R916 E917 W1001
BS03 IFM B R630 D631 W758 D759 D760 E917 Y922 R630 D631 W758 D759 D760 E917 Y922
Gene Ontology
Molecular Function
GO:0016757 glycosyltransferase activity
GO:0046872 metal ion binding
Biological Process
GO:0005975 carbohydrate metabolic process

View graph for
Molecular Function
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Biological Process
External links
PDB RCSB:5h41, PDBe:5h41, PDBj:5h41
PDBsum5h41
PubMed28198470
UniProtA9KJS6

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