Structure of PDB 5ggp Chain B

Receptor sequence
>5ggpB (length=150) Species: 9606 (Homo sapiens) [Search protein sequence]
VLDVEVYSSRSKVYVAVDGTTVLEDEAREQGRGIHVIVLNQATGHVMAKR
VFDTYSPHEDEAMVLFLNMVAPGRVLICTVKDEGSFHLKDTAKALLRSLG
SQAGPALGWRDTWAFVGRKGGPVFGEKHSKSPALSSWGDPVLLKTDVPLS
3D structure
PDB5ggp Carbohydrate-binding domain of the POMGnT1 stem region modulates O-mannosylation sites of alpha-dystroglycan
ChainB
Resolution1.599 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.4.1.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B Y152 F183 W206 Y55 F86 W109
BS02 MAN B Y152 R207 Y55 R110
External links
PDB RCSB:5ggp, PDBe:5ggp, PDBj:5ggp
PDBsum5ggp
PubMed27493216
UniProtQ8WZA1|PMGT1_HUMAN Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 (Gene Name=POMGNT1)

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