Structure of PDB 5fvn Chain B

Receptor sequence
>5fvnB (length=342) Species: 550 (Enterobacter cloacae) [Search protein sequence]
AEIYNKDGNKLDLYGKVDGLHYFSDDDSQDGDQTYMRLGFKGETQVNDQL
TGYGQWEYQIQGNSGENENNSWTRVAFAGLKFGDAGSFDYGRNYGVVYDV
TSWTDVLPEFGGDTYGSDNFMQQRGNGFATYRNSDFFGLVDGLNFAVQYQ
GKNGSASGEDQTNNGRTELRQNGDGVGGSITYNLGEGFGIGTAVSSSKRT
SSQNDLTYGNGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGNLGWAN
KAQNFEVVAQYQFDFGLRPSVAYLQSKGKDLENGYGDQDLLKYVDVGATY
YFNKNMSTYVDYKINLLDDKEFTRNAGISTDDIVALGLVYQF
3D structure
PDB5fvn Gram-negative trimeric porins have specific LPS binding sites that are essential for porin biogenesis.
ChainB
Resolution1.45 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 Z9M B D174 K198 D174 K198
BS02 C8E B Y217 Q236 Y217 Q236
BS03 C8E B Y35 E109 Y35 E109
BS04 PO4 B S117 R170 S117 R170
Gene Ontology
Molecular Function
GO:0015288 porin activity
GO:0046872 metal ion binding
Biological Process
GO:0006811 monoatomic ion transport
GO:0034220 monoatomic ion transmembrane transport
Cellular Component
GO:0009279 cell outer membrane
GO:0016020 membrane
GO:0046930 pore complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5fvn, PDBe:5fvn, PDBj:5fvn
PDBsum5fvn
PubMed27493217
UniProtQ93K99

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