Structure of PDB 5fq6 Chain B

Receptor sequence
>5fq6B (length=941) Species: 818 (Bacteroides thetaiotaomicron) [Search protein sequence]
EKALGYAATSVGGEKIAESRTSDVMSSLAGKIAGVQISSTSSDPGASNSV
IIRGVSSLSGTNQPLYVVDGVPLNNSTVYSTDGLNSGYDFGNGANAINPD
DVANMTILKGAAATALYGSRAANGVVMITTKSGRKEKGVGIEYNGGVQWS
TVLRLPEFQNEFGMGWNGNHTELENGSWGPRFDGSMQLWGNVYNNSQKLK
PYVAMPDNIKDFFDAGFRYSNSLSFNGATDKSDYYVSFSQISDDGMIPTD
ADSYDKYTFSARGSHKAGALTFSSSLNYAYQKNNFATTGQGLSMLNSLYQ
TPRDISIIGLEDQNDPFNTPGYYYTPYGVMNPYYILNNYLNEYESERFYG
KFQLDYEFLKYFKFTYRMGLDTTTGQSDKGKPNLYALYYEGTPNGEGQGS
SSPFSGETGQYSEQITRRREINQDIMVNFNMPVNDFNINALVGFNGNERK
VSYQYSEVNDLTIPTWFNLKNSGKTPIVEQHMELRRLMGVFGQFEGSWKN
MLYLTVTARNDWSSTLPKENRSFFYPGITGSFIFSQDVITFGKIRASWGK
TGNDADVYMVNPVYAQSSNRIPFGSLTFPLGGVNAYSAGNVLGSNTLSPE
MTTESEVGLNMAFFKNRLSFDVSYYNRNTDKQIFSLAMDPASGYTAQNMN
LGKIRNRGIELLISGTPIRTKDFSWELTWNFTKNWSKVISLPEELGGITT
IYGLNGGTSMYAITGMPVGVFKAQVAERDPQGRIVVNSSTGLPVEASEFG
ICGDMNNKYQMGVSTNLKYKGISLGIDFDIRQGGVMYSRTKDINYFTGNA
IQTAYNDRNPLIVPNSVNKIVNGENVTYVENTTPITSSNIYKYWGDGGSD
MGSCFLVDKSYVKLRSVVLGWDLPKRWLAKTPFQAVKVSAYGNNLFVWTP
SSNTFIDPEMTSFGNDLEGNYGEYTANPSSRRFGFNLMVKF
3D structure
PDB5fq6 Structural basis for nutrient acquisition by dominant members of the human gut microbiota.
ChainB
Resolution2.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B W202 E210 N211 Q326 F616 G746 L747 N748 F839 W166 E174 N175 Q290 F573 G703 L704 N705 F796
BS02 KR0 B Y402 I457 Q459 G482 Y366 I421 Q423 G446
BS03 CA B D280 G281 I283 T285 D288 D244 G245 I247 T249 D252
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
Cellular Component
GO:0009279 cell outer membrane

View graph for
Molecular Function
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Cellular Component
External links
PDB RCSB:5fq6, PDBe:5fq6, PDBj:5fq6
PDBsum5fq6
PubMed28077872
UniProtQ8A5H5

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