Structure of PDB 5f88 Chain B

Receptor sequence

>5f88B (length=216) Species: 10090 (Mus musculus) [Search protein sequence]

QVQLKQSGPGLVQPSQSLSITCTVSGFSLTNYGVHWVRQSPGKGLEWLGV
IWSGGNTDYNTPFTSRLSINKDNSKSQVFFKMNSLQSNDTAIYYCARALT
YYDYEFAYWGQGTLVTVSAASTKGPSVFPLAPSSGGTAALGCLVKDYFPE
PVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNV
NHKPSNTKVDKRVEPK

3D structure

PDB

5f88 Natural and non-natural amino-acid side-chain substitutions: affinity and diffraction studies of meditope-Fab complexes.

Chain

Resolution

2.481 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	B	Q39 P41 T90 I92 Q111 L114 E154 P173	Q39 P41 T90 I92 Q111 L114 E150 P169

External links

PDB	RCSB:5f88, PDBe:5f88, PDBj:5f88
PDBsum	5f88
PubMed	27834791

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