Structure of PDB 5eim Chain B

Receptor sequence
>5eimB (length=161) Species: 284812 (Schizosaccharomyces pombe 972h-) [Search protein sequence]
EKGERISMINPRVVLDENGISHRSRYFIMLCDNETAIAHAKKTSIWAVKK
DSSKRISDAYKKASVYFIFVAQQTYNALGYAQVVSDLNSTELPFWSDSSH
AGGVRIKWIKTCNLFSAEISEIVSHMDHGSEARDGMEMMYDEGSRLCTLI
NYAIMKRIGRD
3D structure
PDB5eim Structural insights into the specific recognition of DSR by the YTH domain containing protein Mmi1
ChainB
Resolution1.54 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna B N414 R431 N88 R105 PDBbind-CN: Kd=1.1uM
BS02 rna B N336 R338 Y352 Y392 Y406 K436 T437 Y466 C473 N477 R483 N10 R12 Y26 Y66 Y80 K110 T111 Y140 C147 N151 R157 PDBbind-CN: Kd=1.1uM
Gene Ontology

View graph for
Molecular Function
External links
PDB RCSB:5eim, PDBe:5eim, PDBj:5eim
PDBsum5eim
PubMed28735863
UniProtO74958|MMI1_SCHPO RNA binding exosome specificity factor Mmi1 (Gene Name=mmi1)

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