Structure of PDB 5e9g Chain B

Receptor sequence
>5e9gB (length=525) Species: 242507 (Pyricularia oryzae 70-15) [Search protein sequence]
NMVNPAVEPSMEDDLFAREVAEVKQWWSDPRWRYTKRPFTAEQIVSKRGN
LKIEYPSNAQSKKLWKILEGRFQKRDASYTYGCLEPTMVTQMAKYLDTVY
VSGWQSSSTASSSDEPGPDLADYPYTTVPNKVSHLFMAQLFHDRKQRHER
LSAPKSERSKLQNIDYLRPIIADADTGHGGLTAVMKLTKLFIEKGAAGIH
IEDQAPGTKKCGHMGGKVLVPISEHINRLVAIRAQADIMGVDLLAIARTD
AEAATLITTSIDPRDHAFILGCTNPSLQPLADLMNTAEQSGKTGDQLQAI
EDEWMAKANLKRFDDAVVDVINSSSSIRNPKDVAAKYLQAAKGKSNREAR
AIASSLGVPEIFFDWDSPRTREGYFRIKGGCDCAINRAIAYAPYADAIWM
ESKLPDYEQAKEFAEGVHAVYPEQKLAYNLSPSFNWKTAMPRDEQETYIR
RLAGLGYCWQFITLAGLHTTALISDRFARAYSEVGMRAYGELVQEPEMEL
GVDVVKHQKWSGATYVDELQKMVTG
3D structure
PDB5e9g Crystal structure and functional analysis of isocitrate lyases from Magnaporthe oryzae and Fusarium graminearum
ChainB
Resolution2.1 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) Y104 D123 D177 D179 H204 E206 C215 H217 R252 E405 Q428 S435 S437
Catalytic site (residue number reindexed from 1) Y100 D119 D173 D175 H200 E202 C211 H213 R248 E401 Q424 S431 S433
Enzyme Commision number 4.1.3.1: isocitrate lyase.
4.1.3.30: methylisocitrate lyase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GLV B Y104 S106 G107 W108 D177 T467 Y100 S102 G103 W104 D173 T463
BS02 GOL B C215 G216 H217 R252 E405 N433 T467 C211 G212 H213 R248 E401 N429 T463
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0004451 isocitrate lyase activity
GO:0016829 lyase activity
GO:0046421 methylisocitrate lyase activity
GO:0046872 metal ion binding
Biological Process
GO:0006097 glyoxylate cycle
GO:0006099 tricarboxylic acid cycle
GO:0019752 carboxylic acid metabolic process
Cellular Component
GO:0005737 cytoplasm
GO:0009514 glyoxysome

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5e9g, PDBe:5e9g, PDBj:5e9g
PDBsum5e9g
PubMed27016285
UniProtP0CT06|ACEA_PYRO7 Isocitrate lyase (Gene Name=ICL1)

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