Structure of PDB 5dyd Chain B

Receptor sequence
>5dydB (length=231) Species: 9606 (Homo sapiens) [Search protein sequence]
LSLTADQMVSALLDAEPPILYSEYDPTRPASMMGLLTNLADRELVHMINW
AKRVPGFVDLTLHDQVHLLECAWLEILMIGLVWRSMEHPGKLLFAPNLLL
DRNQGKCVEGMVEIFDMLLATSSRFRMMNLQGEEFVCLKSIILLNSGVYT
FSLEEKDHIHRVLDKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRH
MSNKGMEHLYSMKCKVVPLSDLLLEMLDAHR
3D structure
PDB5dyd Predictive features of ligand-specific signaling through the estrogen receptor.
ChainB
Resolution2.485 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 peptide B I358 K362 V376 I48 K52 V66
BS02 5K1 B M343 T347 A350 E353 L387 F404 H524 L525 M33 T37 A40 E43 L77 F94 H208 L209
External links
PDB RCSB:5dyd, PDBe:5dyd, PDBj:5dyd
PDBsum5dyd
PubMed27107013
UniProtP03372|ESR1_HUMAN Estrogen receptor (Gene Name=ESR1)

[Back to BioLiP]