Structure of PDB 5dwk Chain B

Receptor sequence
>5dwkB (length=111) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
FTRIIKAAGYSWKGLRAAWINEAAFRQEGVAVLLCVVIAAWLDVDAVTRV
LLISSVMLVMIVELLNSAIEAVVDRIGHELSGRAKDLGSAAVLIAIIDAV
ITWAILLWSHF
3D structure
PDB5dwk Data-collection strategy for challenging native SAD phasing.
ChainB
Resolution2.601 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.1.107: diacylglycerol kinase (ATP).
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 78N B A13 A14 A7 A8
BS02 78N B W18 L21 R22 W25 I26 M63 W12 L15 R16 W19 I20 M57
BS03 78N B V42 R55 V36 R49
BS04 78N B A52 R55 A46 R49
BS05 78M B C41 L48 F123 C35 L42 F111
Gene Ontology
Molecular Function
GO:0004143 ATP-dependent diacylglycerol kinase activity
GO:0005524 ATP binding
GO:0016301 kinase activity
GO:0042802 identical protein binding
GO:0046872 metal ion binding
Biological Process
GO:0006654 phosphatidic acid biosynthetic process
GO:0008610 lipid biosynthetic process
GO:0008654 phospholipid biosynthetic process
GO:0009411 response to UV
GO:0016310 phosphorylation
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5dwk, PDBe:5dwk, PDBj:5dwk
PDBsum5dwk
PubMed26960129
UniProtP0ABN1|KDGL_ECOLI Diacylglycerol kinase (Gene Name=dgkA)

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