Structure of PDB 5dqo Chain B

Receptor sequence
>5dqoB (length=154) Species: 9606 (Homo sapiens) [Search protein sequence]
SLDQIDLLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGLTLE
QSFNIRHSYTPFSCLKIILSNPPSQGDYHGCPFRHSDPELLKQKLQSYKI
SPGGISQILDLVKGTHYQVACQKYFEMIHNVDDCGFSLNHPNQFFCESQR
ILNG
3D structure
PDB5dqo The [4Fe4S] cluster of human DNA primase functions as a redox switch using DNA charge transport.
ChainB
Resolution2.3 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.7.7.-
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 SF4 B P285 P286 C287 C367 C384 C424 P444 P14 P15 C16 C64 C81 C121 P141
Gene Ontology
Biological Process
GO:0006269 DNA replication, synthesis of primer

View graph for
Biological Process
External links
PDB RCSB:5dqo, PDBe:5dqo, PDBj:5dqo
PDBsum5dqo
PubMed28232525
UniProtP49643|PRI2_HUMAN DNA primase large subunit (Gene Name=PRIM2)

[Back to BioLiP]