Structure of PDB 5dpl Chain B

Receptor sequence
>5dplB (length=512) Species: 257363 (Rickettsia typhi str. Wilmington) [Search protein sequence]
PYPPFTFSYTYPPYLRTIGKLFGLNPPLLETAKVLDIGCGIGVNLLNFAE
TYPKSQSLGVDLSKTQIELGKKTISDAKINNVELKALSILDLDESYGKFD
YIVCHGVYSWVSQEVQDKILEVLNKLLNPNGIAFVSYNTLPGWNMQNTIR
EMMMFHSHDKLQQARLLLKFINDSLGNSTTPYANFLRDEAKLISTYDDSY
VLHEYLGEINTGTYFHQFIEKAQKNHLNYLGDTSIAAMFIGNLPTKAASK
LQAINDIVCTEQYMDFITNRKFRSTLLCHQNIPINRKIEFDNLKDFYTTF
NIRPISPENKIDLNNEQENISFYYENLPEPFISTTSAIMKAILYVYAENI
SNPIRLEQVAKEAFKKLGKYRLQDFLATLEQHFITLIFQGYLKIFETKPH
AIATITEKPKTSQFARYQAKHAHFTNMFSITNRLNDMIGIPIHEKYILEM
LDGTHNIDDIKKSIIEKINSKLLTACDNKGQVVTDPKLLKEFVDYVVAVS
LEKFRINYLLVG
3D structure
PDB5dpl Structural Insights into Substrate Recognition and Catalysis in Outer Membrane Protein B (OmpB) by Protein-lysine Methyltransferases from Rickettsia.
ChainB
Resolution3.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 SAH B G51 D74 L75 I102 V120 G38 D61 L62 I89 V107
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:5dpl, PDBe:5dpl, PDBj:5dpl
PDBsum5dpl
PubMed27474738
UniProtQ68XQ5

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