Structure of PDB 5doe Chain B

Receptor sequence
>5doeB (length=219) Species: 10360 (Human herpesvirus 5 strain AD169) [Search protein sequence]
PELELKYLNMMKMAITGKESICLPFNFHSHRQHTCLDISPYGNEQVSRIA
CTSCEDNRILPTASDAMVAFINQTSNIMKNRNFYYGFCKSSELLKLSTNQ
PPIFQIYYLLHAANHDIVPFMHAEDGRLHMHVIFENPDVHIPCDCITQML
TAAREDYSVTLNIVRDHVVISVLCHAVSASSVKIDVTILQRKIDEMDIPN
DVSESFERYKELIQELCQS
3D structure
PDB5doe Unexpected features and mechanism of heterodimer formation of a herpesvirus nuclear egress complex.
ChainB
Resolution3.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN B C106 R119 H211 C35 R48 H140
Gene Ontology
Biological Process
GO:0046765 viral budding from nuclear membrane
GO:0046802 exit of virus from host cell nucleus by nuclear egress

View graph for
Biological Process
External links
PDB RCSB:5doe, PDBe:5doe, PDBj:5doe
PDBsum5doe
PubMed26511021
UniProtP16794|NEC1_HCMVA Nuclear egress protein 1 (Gene Name=NEC1)

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