Structure of PDB 5dnk Chain B

Receptor sequence
>5dnkB (length=502) Species: 272947 (Rickettsia prowazekii str. Madrid E) [Search protein sequence]
ESYPYAITNPYHLSTLATLFGINAPEVENSKILELGCAAGGNLIPHAVLY
PNAHFVGVDLSKVQIDEANKNVRALGLKNIEFHHCSITDIDDSFGKFDYI
ICHGVISWVPKIVRDKIFKVCNRNLSTNGIAYISYNTLPGWNMVRTIRDM
MLYHSSSFTNIRDRIAQSRLLLEFVKDSLEHSKTPYAEVLKTEAGLLAKQ
TDHYLRHDHLEEENAQFYFHEFMNEARKHNLQYLADCNISTMYLGNMPPK
VVEQLKAVNDIVRTEQYMDFITNRRFRTTLLCHNDLKINRNINNDDIKKF
NIIFNVIPEKPLKEVDLNNATENLQFFLNGNKESNLSTTSPYMKAILYTF
SENLNNPLSFKQVTSEANTKLNNTKLNEIKNELLNNAMKLVLQGYISITN
QKHRSKPVLDKPKTTQMVIYQAKYTPSMWVTNLKHEPIGVNFFEKFALRY
MDGRNDKKAIIEAILGHVEKGELTLSKEEIRKELESLFTPMIEKFCSNAL
LV
3D structure
PDB5dnk Structural Insights into Substrate Recognition and Catalysis in Outer Membrane Protein B (OmpB) by Protein-lysine Methyltransferases from Rickettsia.
ChainB
Resolution1.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 SAH B Y48 G79 D102 L103 S129 I130 H146 V152 Y5 G36 D59 L60 S86 I87 H103 V109
External links
PDB RCSB:5dnk, PDBe:5dnk, PDBj:5dnk
PDBsum5dnk
PubMed27474738
UniProtO05979|Y789_RICPR Uncharacterized protein RP789 (Gene Name=RP789)

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