Structure of PDB 5dl8 Chain B

Receptor sequence
>5dl8B (length=391) Species: 557600 (Acinetobacter baumannii AB307-0294) [Search protein sequence]
NPNQQTEDEWKFTLKNAYINRDFDNDALKDTGSWSQAASLFYKSKMHDTP
LVIADKPITIGADASVQYAVRLSSDKHVADTVLPFNKETQSQASDYLKYG
ATLKLGYDKTLLSVGELWLDLPVTAVDASRQLLTSYWGTNLKSQLSDQLY
AEIGRVEKVSPRNEEDFKKFSFTANGITKESDGLNYIDLRYQFTPSLKGE
YYFGNLEDLYNKHYVGLEHTWKQPTFALTSKFKYFNAKDDGNTFDIDAEN
IGLLETVKVKNHTFGLGYQQIIGESAYPLPDGFLPETYFINWNATGFFKE
DEKSYHVMYGYDFKDYIPGLNAMVKYVYGHDFKAANGEKNHETESNVILN
YAFQQPLLKGFALQYIRIDYNVKHGNDFGEDRLFVNYTKKF
3D structure
PDB5dl8 Structural Insights into Outer Membrane Permeability of Acinetobacter baumannii.
ChainB
Resolution2.2 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 C8E B T195 S197 H220 T194 S196 H219
BS02 CA B D23 F24 D31 D22 F23 D30
BS03 CA B V373 G376 D378 V372 G375 D377
Gene Ontology
Molecular Function
GO:0015288 porin activity
GO:0046872 metal ion binding
Biological Process
GO:0055085 transmembrane transport
Cellular Component
GO:0016020 membrane

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:5dl8, PDBe:5dl8, PDBj:5dl8
PDBsum5dl8
PubMed26805524
UniProtA0A0D5YI36

[Back to BioLiP]