Structure of PDB 5dd7 Chain B

Receptor sequence
>5dd7B (length=305) Species: 470 (Acinetobacter baumannii) [Search protein sequence]
MAEFSIIDQYFNRQSHPDVALGIGDDSALITPPPNQQLVICADTLVAGRH
FPLETSPHAIGWKSVAVNLSDIAAMGAKPHSILLAISLPQVDHEWLEGFS
QGIYDCCNQFGVALIGGDTTQGPHLTITVTAMGWIETGKAVLRSGAKVGD
YVCVSGQIGDAAYGLQHLGHSLQQRLDYPTPRCKLGEELKGLASSMIDVS
DGLAQDLGHILKASKVGARLILEKLPVDPVLQQIEEQQRWQYALAGGDDY
ELCFTITPQNYEKLLQKQLDVKITMIGQIVEQTKLTFEHLGSDYPLQIHG
YQHFA
3D structure
PDB5dd7 Crystal structures of thiamine monophosphate kinase from Acinetobacter baumannii in complex with substrates and products.
ChainB
Resolution1.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.4.16: thiamine-phosphate kinase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ANP B D43 D71 S200 D201 D43 D71 S200 D201
BS02 TPS B R49 H50 L165 S200 D201 D248 Y301 H303 R49 H50 L165 S200 D201 D248 Y301 H303
BS03 MG B D43 D71 D43 D71
BS04 MG B D71 D198 D71 D198
BS05 ANP B I7 F11 I23 G24 D25 L84 G116 G117 D118 T119 I7 F11 I23 G24 D25 L84 G116 G117 D118 T119
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0005524 ATP binding
GO:0009030 thiamine-phosphate kinase activity
GO:0016301 kinase activity
GO:0046872 metal ion binding
Biological Process
GO:0009228 thiamine biosynthetic process
GO:0009229 thiamine diphosphate biosynthetic process
GO:0016310 phosphorylation

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Molecular Function
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Biological Process
External links
PDB RCSB:5dd7, PDBe:5dd7, PDBj:5dd7
PDBsum5dd7
PubMed30867460
UniProtA0A0D5YC82

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