Structure of PDB 5d9m Chain B

Receptor sequence
>5d9mB (length=347) Species: 77095 (Segatella bryantii) [Search protein sequence]
TYMEESAQSAVDNFGLGFNLGNTLDANGCGTGKPVATYETFWGQPETTQD
MMTFLMQNGFNAVRIPVTWYEHMDAEGNVDEAWMMRVKAIVEYAMNAGLY
AIVNVHHDTAAGSGAWIKADTDVYAATKEKFKKLWTQIANALADYDQHLL
FEGYNEMLDGNNSWDEPQKASGYEALNNYAQDFVDAVRATGGNNATRNLI
VNTYAAAKGENVLNNFMLPTDAVNNHLIVQVHSYDPWNFFNTKTTWDSEC
HNTLTEIFSALSKKFTTIPYIIGAYGTHGESDISVSKSSPAEKIKLAADQ
AADMVKLAKDHHSATFYWMSIFDGSDRIQPQWSLPTVVEAMQEAYNN
3D structure
PDB5d9m Structure-Function Analysis of a Mixed-linkage beta-Glucanase/Xyloglucanase from the Key Ruminal Bacteroidetes Prevotella bryantii B14.
ChainB
Resolution1.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GLC B H112 H113 N161 E162 Y240 D288 W324 H106 H107 N155 E156 Y234 D282 W318
BS02 BGC B N28 W48 D288 W324 N22 W42 D282 W318
BS03 XYS B H113 A117 H107 A111
Gene Ontology
Molecular Function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
Biological Process
GO:0000272 polysaccharide catabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:5d9m, PDBe:5d9m, PDBj:5d9m
PDBsum5d9m
PubMed26507654
UniProtO06842

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