Structure of PDB 5d9i Chain B

Receptor sequence
>5d9iB (length=132) [Search protein sequence]
GSKVEDPKDFPSELLSFLSHAVFSNRTLACFAIYTTKEKAALLYKKIMEK
YSVTFISRHNSYNHNILFFLTPHRHRVSAINNYAQKLCTFSFLICKGVNK
EYLMYSALTRDPFSVIEESLPGGLKEHDFNPE
3D structure
PDB5d9i Structure-based analysis of the interaction between the simian virus 40 T-antigen origin binding domain and single-stranded DNA.
ChainB
Resolution1.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.6.4.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B S152 N153 R154 N227 S24 N25 R26 N99
BS02 CA B K167 A212 Q213 C216 K39 A84 Q85 C88
Gene Ontology
Molecular Function
GO:0003688 DNA replication origin binding
Biological Process
GO:0006260 DNA replication

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Molecular Function
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Biological Process
External links
PDB RCSB:5d9i, PDBe:5d9i, PDBj:5d9i
PDBsum5d9i
PubMed20980496
UniProtP03070|LT_SV40 Large T antigen

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