Structure of PDB 5d79 Chain B

Receptor sequence
>5d79B (length=490) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
HEDFLKCVIHTSKDSSFFSILDSSIQNPRFSVSETPKPVSIITPVKASDV
QTVIRCAQLHGIHVRTRSAGHCYEGLSYIAYNKPFAVIDLRNLRSISLDV
DNRTGWVQTGATAGELYYEIGKTTKSLAFPAGIHPTVGVGGQFSGGGYGT
LLRKYGLAADNIIDALVVDASGRILDRQAMGEDYFWAIRGGGGSSFGVIL
SWKVKLVDVPSTITVFKVQKTSKKEAVRIIKKWQYAADKVPDDLFIRTTL
ERSNKNAVHALFTGLYIGPVNNLLALMEEKFPELGLEKEGCEEMSWIESV
LWFADFPKGESLGVLTNRERTSLSFKGKDDFVQEPIPEAAIQEIWRRLEA
PEARLGKIILTPFGGKMSEMAEYETPFPHRGGNLYEIQYVAYWREEEDKN
KTETDKYLKWVDSVYEFMTPYVSKSPRGAYVNFKDMDLGMYLGKKKTKYE
EGKSWGVKYFKNNFERLVRVKTRVDPTDFFCDEQSIPLVN
3D structure
PDB5d79 Structure of a Berberine Bridge Enzyme-Like Enzyme with an Active Site Specific to the Plant Family Brassicaceae.
ChainB
Resolution1.849 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.1.1.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CL B G172 H174 G132 H134
BS02 FAD B T106 S108 A109 G110 H111 C112 Y113 S117 T149 H174 V177 G178 G180 G181 Q182 Y188 G233 S234 V238 I239 Y470 N472 F473 T66 S68 A69 G70 H71 C72 Y73 S77 T109 H134 V137 G138 G140 G141 Q142 Y148 G193 S194 V198 I199 Y430 N432 F433
Gene Ontology
Molecular Function
GO:0016491 oxidoreductase activity
GO:0050660 flavin adenine dinucleotide binding
GO:0071949 FAD binding

View graph for
Molecular Function
External links
PDB RCSB:5d79, PDBe:5d79, PDBj:5d79
PDBsum5d79
PubMed27276217
UniProtQ9FI21|BBE28_ARATH Berberine bridge enzyme-like 28 (Gene Name=At5g44440)

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