Structure of PDB 5d4v Chain B

Receptor sequence
>5d4vB (length=260) Species: 2190 (Methanocaldococcus jannaschii) [Search protein sequence]
GITEMVKTIDTKTRVVDVTNEIAKKKYQAIRDFLEGEEFKEVVIFGVYLW
GNYTAQMLSKYADKVYLVDIHEFMKGFVPNNNSIKFLNLNEFKLKFIRGE
VNPDLIVDLTGLGGIEPEFLAKFNPKVFIVEDPKGVFDVDIYEADNTYKR
TAPFIEKAKVGVLKTYRKARVSKTSGTMTLTIDTIVDASREITSLDGVLY
AIPNLRYYEGILFHENDIHKFLSEISQPAITISTLNDVLDEAEEILSNNI
NLIYSFVEEL
3D structure
PDB5d4v Identification of HcgC as a SAM-Dependent Pyridinol Methyltransferase in [Fe]-Hydrogenase Cofactor Biosynthesis.
ChainB
Resolution1.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 SAH B Y56 L57 W58 D77 I78 L117 T118 E139 T185 Y48 L49 W50 D69 I70 L109 T110 E131 T177
BS02 YGP B Y156 K157 E266 Y148 K149 E258
External links
PDB RCSB:5d4v, PDBe:5d4v, PDBj:5d4v
PDBsum5d4v
PubMed27391308
UniProtQ57913|Y489_METJA Uncharacterized protein MJ0489 (Gene Name=MJ0489)

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