Structure of PDB 5cq9 Chain B

Receptor sequence
>5cq9B (length=270) Species: 99287 (Salmonella enterica subsp. enterica serovar Typhimurium str. LT2) [Search protein sequence]
VWDRFKDCFRTHKKQEVLEVLYTLIHGCTGMEKIHAFTQLKEYANPSQQD
RFVMRFDMNQTQVLFEIDGKVIDKCNLHRLLNVSENCIFKVMEEDEEELF
LKICIKYGEKISRYPELLEGFANKLKDAVNEDDDVKDEVYKLMRSGEDRK
MECVEWNGTLTEEEKNKLRCLQMGSFNITTQFFKIGYWELEGEVLFDMVH
PTLSYLLQAYKPSLSLIETNTMLFSDVLNKDYDDYQNNKREIDAILRRIY
RSHNNTLFISEKSSCRNMLI
3D structure
PDB5cq9 Salmonella Disrupts Host Endocytic Trafficking by SopD2-Mediated Inhibition of Rab7.
ChainB
Resolution3.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B L53 L56 Y90 L18 L21 Y43
Gene Ontology
Biological Process
GO:0030254 protein secretion by the type III secretion system
Cellular Component
GO:0005576 extracellular region
GO:0016020 membrane
GO:0020002 host cell plasma membrane
GO:0033644 host cell membrane

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Biological Process
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Cellular Component
External links
PDB RCSB:5cq9, PDBe:5cq9, PDBj:5cq9
PDBsum5cq9
PubMed26299973
UniProtQ8ZQC8|SOPD2_SALTY Secreted effector protein sopD2 (Gene Name=sopD2)

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