Structure of PDB 5byn Chain B

Receptor sequence
>5bynB (length=237) Species: 28957 (Canavalia lineata) [Search protein sequence]
ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTA
HIIYNSVGKRLSAVVSYPNGDSATVSYDVDLDNVLPEWVRVGLSASTGLY
KETNTILSWSFTSKLKSNSTHETNALHFVFNQFSKDQKDLILQGDATTGT
DGNLELTRVSSNGSPQGNSVGRALFYAPVHIWESSAVVASFDATFTFLIK
SSDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN
3D structure
PDB5byn Canavalia maritima lectin complexed with synthetic selenoamino acid
ChainB
Resolution2.651 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 4WM B K114 H121 K114 H121
BS02 4WM B H51 I53 K114 S190 F191 D192 H51 I53 K114 S190 F191 D192
BS03 CA B D10 Y12 N14 D19 D10 Y12 N14 D19
BS04 MN B E8 D10 D19 H24 E8 D10 D19 H24
Gene Ontology
Molecular Function
GO:0005515 protein binding
GO:0005537 D-mannose binding
GO:0030246 carbohydrate binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:5byn, PDBe:5byn, PDBj:5byn
PDBsum5byn
PubMed
UniProtP81460|CONA_CANLI Concanavalin-A

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