Structure of PDB 5byg Chain B

Receptor sequence
>5bygB (length=201) Species: 648242 (Adeno-associated virus 2 Srivastava/1982) [Search protein sequence]
MPGFYEIVIKVPSDGISDSFVNWVAEKEWELPPDSDMDLNLIEQAPLTVA
EKLQRDFLTEWRRVSKAPEALFFVQFEKGESYFHMHVLVETTGVKSMVLG
RFLSQIREKLIQRIYRGIEPTLPNWFAVTKTRNGAGGGNKVVDESYIPNF
LLPKTQPELQWAWTNMEQYLSACLNLTERKRLVAQHLTHVSQTQEQNKEN
Q
3D structure
PDB5byg Structural Insights into the Assembly of the Adeno-associated Virus Type 2 Rep68 Protein on the Integration Site AAVS1.
ChainB
Resolution2.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B V104 R107 F108 Q111 R138 A141 V98 R101 F102 Q105 R132 A135
BS02 dna B S102 M103 G106 R107 K136 R138 G142 G143 G144 N145 S96 M97 G100 R101 K130 R132 G136 G137 G138 N139
BS03 MG B H90 H92 H84 H86
External links
PDB RCSB:5byg, PDBe:5byg, PDBj:5byg
PDBsum5byg
PubMed26370092
UniProtQ89268|REP78_AAV2S Protein Rep78 (Gene Name=Rep78)

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