Structure of PDB 5bxy Chain B

Receptor sequence
>5bxyB (length=153) Species: 309807 (Salinibacter ruber DSM 13855) [Search protein sequence]
VPTPKPVVDRMLELADVDETDVLYDLGSGDGRIVIRAARTHGARGVGIEI
DPDLVKKARKNAKEAGVADLVEFRQGDLFEADISEATVVTLYLLPSVNQK
LRPILFEQLSPGTPVVSHDFDMGRWAPDRTVDLEGDTVYRWTIPEEIPED
LDE
3D structure
PDB5bxy Crystal structure of RNA methylase family protein from Salinibacterruber in complex with S-Adenosyl-L-homocysteine.
ChainB
Resolution1.75 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.1.1.-
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 SAH B V5 T7 D29 G31 E53 I54 D81 L82 Y96 V1 T3 D25 G27 E49 I50 D77 L78 Y92
Gene Ontology
Molecular Function
GO:0008168 methyltransferase activity
GO:0016279 protein-lysine N-methyltransferase activity
Biological Process
GO:0018023 peptidyl-lysine trimethylation
GO:0032259 methylation
GO:1905273 positive regulation of proton-transporting ATP synthase activity, rotational mechanism

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Molecular Function

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Biological Process
External links
PDB RCSB:5bxy, PDBe:5bxy, PDBj:5bxy
PDBsum5bxy
PubMed
UniProtQ2S3S9

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