Structure of PDB 5bk7 Chain B

Receptor sequence
>5bk7B (length=368) Species: 141454 (Streptomyces wadayamensis) [Search protein sequence]
KENLTQWAYLALNSELNIADGHARQALSPGQQKIVNELPVLWAESEQRPV
QQIESEAHQAYFTLLGQHGYPAEPGRVLSCYSSSVSMEILARSLSASVDR
VALVHPTFDNIADLLRGNGLDLVPVEEDALHGADLSAELLSSVGCVFVTT
PNNPTGRVLAEERLRRLAEQCAEHGTVLALDTSFRGFDAAAHYDHYAVLQ
EAGCRWVVIEDTGKLWPTLDLKAGLLVFSEDIGLPVEKIYSDILLGVSPL
ILALIREFSRDAADGGLADLHAFILHNRSVVRRALAGVEGVSFPDPESRS
SVERVAFAGRTGTEVWEELQRHHVFALPCRQFHWAEPSDGDHMVRIALSR
STEPLEKSVQVLRTVLET
3D structure
PDB5bk7 Streptomyces wadayamensis MppP is a PLP-Dependent Oxidase, Not an Oxygenase.
ChainB
Resolution2.196 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 EQJ B D249 I250 D242 I243
BS02 EQJ B T12 D27 G28 S89 S90 S91 F115 N160 D188 K221 K229 R352 T5 D20 G21 S82 S83 S84 F108 N153 D181 K214 K222 R345
Gene Ontology
Molecular Function
GO:0008483 transaminase activity
GO:0030170 pyridoxal phosphate binding
GO:0046872 metal ion binding
Biological Process
GO:0006520 amino acid metabolic process
GO:0009058 biosynthetic process

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Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5bk7, PDBe:5bk7, PDBj:5bk7
PDBsum5bk7
PubMed29473729
UniProtA0A0X1KHF5

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