Structure of PDB 5b7p Chain B

Receptor sequence
>5b7pB (length=247) Species: 380703 (Aeromonas hydrophila subsp. hydrophila ATCC 7966) [Search protein sequence]
SAPILIQGAMDVEVETLVAALKDKQELTVGSWTYWQGTLSGYPVVVSRTE
VGLANAAAATTLAMERFQPRLVINQGTAGGHDPALHRGDIVIGTKSFNMG
AYRSDLTPAEQGVDPSKWHNFEVTMRLRDNGKLVEHSSFAGDPELVGRAL
GMADRYRHGRVVPGIIGTADEWNRQVARINWLHQTYQTAAEMETSSAALV
AEAYKVPFVGIRVLSNTDLHGEEFDPQTAIHCQQFVIDYAKALINGF
3D structure
PDB5b7p Structural and Functional Analyses of Periplasmic 5'-Methylthioadenosine/S-Adenosylhomocysteine Nucleosidase from Aeromonas hydrophila.
ChainB
Resolution1.49 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) A90
Catalytic site (residue number reindexed from 1) A63
Enzyme Commision number 3.2.2.16: methylthioadenosine nucleosidase.
3.2.2.9: adenosylhomocysteine nucleosidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MTA B T104 A105 G106 W199 E218 M220 E221 N244 T77 A78 G79 W172 E191 M192 E193 N216
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0008782 adenosylhomocysteine nucleosidase activity
GO:0008930 methylthioadenosine nucleosidase activity
GO:0016798 hydrolase activity, acting on glycosyl bonds
Biological Process
GO:0009116 nucleoside metabolic process
GO:0019284 L-methionine salvage from S-adenosylmethionine
Cellular Component
GO:0005829 cytosol

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Biological Process
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Cellular Component
External links
PDB RCSB:5b7p, PDBe:5b7p, PDBj:5b7p
PDBsum5b7p
PubMed28862845
UniProtA0KGU9

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