Structure of PDB 5axn Chain B

Receptor sequence
>5axnB (length=239) Species: 2214 (Methanosarcina acetivorans) [Search protein sequence]
TREIYAEMRCIPPVVLRADGRNFKNTLSGLGFEKPYDKTFARAMADTAEL
FIKKSGLSPLFAYTFSDEISFLFTDLPFDGRVEKIDSVVASFLGSALTIK
LRLEEPIAFDSRLVALQKEEIPEYFHRRQLEAWRNFVASWGYYALRNEGM
GRNEAAKYLKRKKESEIHEMLFERGINLATLPSWQRRGVIISKEAREIQG
FNPVSGKEEKSLRRKITQNWEIPKFKSEKGIPFLEKLIN
3D structure
PDB5axn Template-dependent nucleotide addition in the reverse (3'-5') direction by Thg1-like protein
ChainB
Resolution2.703 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna B G58 S60 D77 P79 F80 G202 F203 N204 P205 V206 E211 S213 R215 G56 S58 D75 P77 F78 G200 F201 N202 P203 V204 E209 S211 R213
BS02 GNP B R83 K86 R81 K84
BS03 GNP B D21 G22 R23 N24 K26 E35 P37 D39 F42 S68 D69 D19 G20 R21 N22 K24 E33 P35 D37 F40 S66 D67
BS04 MG B D21 G22 D69 D19 G20 D67
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0005525 GTP binding
GO:0008193 tRNA guanylyltransferase activity
GO:0046872 metal ion binding
Biological Process
GO:0006400 tRNA modification
GO:0008033 tRNA processing
GO:0099116 tRNA 5'-end processing

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Molecular Function
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Biological Process
External links
PDB RCSB:5axn, PDBe:5axn, PDBj:5axn
PDBsum5axn
PubMed27051866
UniProtA0A1C7D1G9

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