Structure of PDB 5axl Chain B

Receptor sequence
>5axlB (length=221) Species: 2214 (Methanosarcina acetivorans) [Search protein sequence]
TREIYAEMRCIPPVVLRADGRNFKNTLSGLGFEKPYDKTFARAMADTAEL
FIKKSGLSPLFAYTFSDEISFLFTDLPFDGRVEKIDSVVASFLGSALTIK
LRLEEPIAFDSRLVALQKEEIPEYFHRRQLEAWRNFVASWGYYALRNEGM
GRNEAAKYLKRKKESEIHEMLFERGINLATLPSWQRRGVIISKEARKITQ
NWEIPKFKSEKGIPFLEKLIN
3D structure
PDB5axl Template-dependent nucleotide addition in the reverse (3'-5') direction by Thg1-like protein
ChainB
Resolution2.998 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GTP B D21 G22 R23 N24 P37 F42 D69 D19 G20 R21 N22 P35 F40 D67
BS02 MG B D21 G22 D69 D19 G20 D67
BS03 MG B D21 D69 D19 D67
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0005525 GTP binding
GO:0008193 tRNA guanylyltransferase activity
GO:0046872 metal ion binding
Biological Process
GO:0006400 tRNA modification
GO:0008033 tRNA processing
GO:0099116 tRNA 5'-end processing

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Molecular Function
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Biological Process
External links
PDB RCSB:5axl, PDBe:5axl, PDBj:5axl
PDBsum5axl
PubMed27051866
UniProtA0A1C7D1G9

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