Structure of PDB 4zod Chain B

Receptor sequence
>4zodB (length=721) Species: 272626 (Listeria innocua Clip11262) [Search protein sequence]
MEQEKVQELVSQMTLDEKIAQCLQLSPFLFKGTNKNAELTGPLLQEMKLT
DAHTENAGSVLGSSSALDMIGIQEAYLKTNRLGIPLVFMADVIHGYKTVF
PIPLALGCSFDRETVRVMAEVSALEATADGHHVTFSPMLDLVRDPRWGRV
MESTGEDPFLNSELGKAMVDGYQGDASKLNENLEQMAACVKHFAAYGAAE
AGLEYNTVNMSTRELYQNYLPAYNAAIQAGAKLVMTAFNVVDGIPATMNK
WLNRDVLRGEMEFDGVLISDWGAVAEVINHGTARNPKEAAQFSMEAGVDL
EMMTTCYIHELKGLIEEGKLSENLLDEAVLRMLNLKNDLGLFEDPYRGLD
RTKDILTDESRGKARAAGVESAVLLENKSRLLPLAKEAKIALVGPLATSP
DILGGWNVYGEEKDGINVETGLREVFETVEVVSTEYTELSEEDKVAVKAA
VQNMDVVVLALGEKNEWGGEAGSLATIRLPEAQYQLAKFVQTLGKPVVIT
LFNGRPLEVKELAESSDALLELWFPGTEAGRVTADLLSGASNPSGKLSMS
FPQTTGQIPVYYNHLRTGRPQTPENKGERYVSHYLDIPNEPFYPFGYGKS
YSEFELKTSSLPKELNLGESLHVEVTIKNISDIAGKEVIQVYLQDVTASI
SRPVKELKAFEKVALQAGEEKTVTFELTSEAFSFYNHQLEKVQEPGLHRV
FVGTSSEDVDVFEVEVGGYVL
3D structure
PDB4zod Functional and Structural Analysis of a beta-Glucosidase Involved in beta-1,2-Glucan Metabolism in Listeria innocua
ChainB
Resolution2.1 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) D270 G471
Catalytic site (residue number reindexed from 1) D270 G468
Enzyme Commision number 3.2.1.21: beta-glucosidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 BGC B D91 F135 R149 K191 H192 D270 E473 D91 F135 R149 K191 H192 D270 E470
BS02 BGC B D242 I244 N249 W251 D242 I244 N249 W251
BS03 MG B D648 T650 D645 T647
Gene Ontology
Molecular Function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0008422 beta-glucosidase activity
GO:0016798 hydrolase activity, acting on glycosyl bonds
GO:0046872 metal ion binding
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0009251 glucan catabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:4zod, PDBe:4zod, PDBj:4zod
PDBsum4zod
PubMed26886583
UniProtQ92AS9

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