Structure of PDB 4ygw Chain B

Receptor sequence
>4ygwB (length=103) Species: 9913 (Bos taurus) [Search protein sequence]
SSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTN
CYQSYSTMSITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFD
ASV
3D structure
PDB4ygw Acetone-Linked Peptides: A Convergent Approach for Peptide Macrocyclization and Labeling.
ChainB
Resolution2.18 Å
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Catalytic site (original residue number in PDB) K41 H119 F120 D121
Catalytic site (residue number reindexed from 1) K20 H98 F99 D100
Enzyme Commision number 4.6.1.18: pancreatic ribonuclease.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 peptide B Y25 R33 K41 N44 T45 F46 V47 H48 E49 L51 V54 P117 V118 H119 F120 Y4 R12 K20 N23 T24 F25 V26 H27 E28 L30 V33 P96 V97 H98 F99
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding

View graph for
Molecular Function
External links
PDB RCSB:4ygw, PDBe:4ygw, PDBj:4ygw
PDBsum4ygw
PubMed26096515
UniProtP61823|RNAS1_BOVIN Ribonuclease pancreatic (Gene Name=RNASE1)

[Back to BioLiP]