Structure of PDB 4yfy Chain B

Receptor sequence
>4yfyB (length=241) Species: 126385 (Providencia alcalifaciens) [Search protein sequence]
MKKILVISDNYQLVSYIKNLYLSNEEWSKELFIDYSYSSINRNPQSLIEL
GMTEIDIKNKNLNELNDYHLIISAHCKQIFPAHIVNNKLCINIHPGLNPY
NRGWFPQVFSILNKKPIGATIHKMDSEVDHGEIYCQEEVSILSHETSIDI
YNKVIELEKKLIKNNLLKIINNELQPKLPSQEGNYNSIQDFNKLCKLNLE
DNGSLREHIDLLRALTHGDFKNAYFYDENNTKVFVKIELSL
3D structure
PDB4yfy Molecular structure of an N-formyltransferase from Providencia alcalifaciens O30.
ChainB
Resolution1.9 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 0FX B N10 H75 K77 W104 F105 Q107 Y151 H217 F220 N222 N10 H75 K77 W104 F105 Q107 Y151 H217 F220 N222
BS02 1YJ B C76 K77 Q78 I79 F80 N92 W104 M124 D125 E127 V128 D129 C76 K77 Q78 I79 F80 N92 W104 M124 D125 E127 V128 D129
Gene Ontology
Molecular Function
GO:0004479 methionyl-tRNA formyltransferase activity
Biological Process
GO:0006413 translational initiation
GO:0009058 biosynthetic process
GO:0071951 conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
Cellular Component
GO:0005829 cytosol

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:4yfy, PDBe:4yfy, PDBj:4yfy
PDBsum4yfy
PubMed25752909
UniProtM9P0Q2

[Back to BioLiP]