Structure of PDB 4x7q Chain B

Receptor sequence
>4x7qB (length=243) Species: 9606 (Homo sapiens) [Search protein sequence]
AFEAEYRLGPLLGKGFGTVFAGHRLTDRLQVAIKVIPRCPLEVALLWKVG
AGGGHPGVIRLLDWFETFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFF
GQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPY
TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI
LEAELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQ
3D structure
PDB4x7q Structure-based design of low-nanomolar PIM kinase inhibitors.
ChainB
Resolution2.33 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) D163 K165 N168 D182 T200
Catalytic site (residue number reindexed from 1) D119 K121 N124 D138 T156
Enzyme Commision number 2.7.11.1: non-specific serine/threonine protein kinase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 3YR B F43 V46 A59 K61 E117 R118 A122 D124 E167 L170 I181 D182 F16 V19 A32 K34 E73 R74 A78 D80 E123 L126 I137 D138 MOAD: ic50=14nM
PDBbind-CN: -logKd/Ki=7.85,IC50=14nM
BindingDB: IC50=14nM
Gene Ontology
Molecular Function
GO:0004672 protein kinase activity
GO:0004674 protein serine/threonine kinase activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0044024 histone H2AS1 kinase activity
GO:0106310 protein serine kinase activity
Biological Process
GO:0000082 G1/S transition of mitotic cell cycle
GO:0006338 chromatin remodeling
GO:0006468 protein phosphorylation
GO:0006915 apoptotic process
GO:0007346 regulation of mitotic cell cycle
GO:0008285 negative regulation of cell population proliferation
GO:0008637 apoptotic mitochondrial changes
GO:0009615 response to virus
GO:0010508 positive regulation of autophagy
GO:0016236 macroautophagy
GO:0016239 positive regulation of macroautophagy
GO:0016310 phosphorylation
GO:0043066 negative regulation of apoptotic process
GO:0043123 positive regulation of canonical NF-kappaB signal transduction
GO:0045893 positive regulation of DNA-templated transcription
GO:0050821 protein stabilization
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4x7q, PDBe:4x7q, PDBj:4x7q
PDBsum4x7q
PubMed25575657
UniProtQ9P1W9|PIM2_HUMAN Serine/threonine-protein kinase pim-2 (Gene Name=PIM2)

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