Structure of PDB 4wwc Chain B

Receptor sequence
>4wwcB (length=231) Species: 224308 (Bacillus subtilis subsp. subtilis str. 168) [Search protein sequence]
HMNINKQSPIPIYYQIMEQLKTQIKNGELQPDMPLPSEREYAEQFGISRM
TVRQALSNLVNEGLLYRLKGRGTFVSKPKMEQGLTSFTEDMKSRGMTPGS
RLIDYQLIDSEELAAILGCGPSSIHKITRVRLANDIPMAIESSHIPFELA
GELNESIYDHIERYNSIPISRAKQELEPSAATTEEANILGIQKGAPVLLI
KRTTYLQNGTAFEHAKSVYRGDRYTFVHYMD
3D structure
PDB4wwc Structural insight into operator dre-sites recognition and effector binding in the GntR/HutC transcription regulator NagR.
ChainB
Resolution2.903 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B S36 E37 R38 R48 M49 R52 R66 G69 G71 T72 S37 E38 R39 R49 M50 R53 R67 G70 G72 T73
BS02 dna B P10 I11 Y12 I46 S47 M49 T50 P11 I12 Y13 I47 S48 M50 T51
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003700 DNA-binding transcription factor activity
Biological Process
GO:0006355 regulation of DNA-templated transcription
GO:0045892 negative regulation of DNA-templated transcription

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Molecular Function
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Biological Process
External links
PDB RCSB:4wwc, PDBe:4wwc, PDBj:4wwc
PDBsum4wwc
PubMed25564531
UniProtO34817|NAGR_BACSU HTH-type transcriptional repressor NagR (Gene Name=nagR)

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