Structure of PDB 4wmo Chain B

Receptor sequence
>4wmoB (length=277) Species: 8355 (Xenopus laevis) [Search protein sequence]
GYRSCNEIKSSDSRAPDGIYTLATEDGESYQTFCDMTTNGGGWTLVASVH
ENNMFGKCTVGDRWSTQQGNMLQNPEGDGNWANYATFGLPEGATSDDYKN
PGYYDIEAKNLALWHVPNKTPMVMWRNSSILRYRTQNGFLTEEGGNLFEL
YKKYPVKYDIGKCLADNGPAVPVVYDLGSAEKTASLYSPNGRSEFTPGFV
QFRAVNSERATLALCAGVKVKGCNVEHHCIGGGGYIPEGSPRQCGDFAAL
DWDGYGTNLGWSASKQIIEAAVMLFYR
3D structure
PDB4wmo Structures of Xenopus Embryonic Epidermal Lectin Reveal a Conserved Mechanism of Microbial Glycan Recognition.
ChainB
Resolution2.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA B N289 E291 E303 N224 E226 E238
BS02 CA B E116 N118 G121 D127 E51 N53 G56 D62
BS03 CA B H115 G126 D162 D311 H50 G61 D97 D246
Gene Ontology
Molecular Function
GO:0005509 calcium ion binding
GO:0030246 carbohydrate binding
GO:0046872 metal ion binding
GO:0070492 oligosaccharide binding
Biological Process
GO:0034214 protein hexamerization
Cellular Component
GO:0005576 extracellular region
GO:0005615 extracellular space
GO:0030133 transport vesicle
GO:0030141 secretory granule
GO:0031410 cytoplasmic vesicle

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Cellular Component
External links
PDB RCSB:4wmo, PDBe:4wmo, PDBj:4wmo
PDBsum4wmo
PubMed26755729
UniProtQ5PPM0|ITLN1_XENLA Intelectin-1 (Gene Name=itln1)

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