Structure of PDB 4u8t Chain B

Receptor sequence
>4u8tB (length=154) Species: 559307 (Zygosaccharomyces rouxii CBS 732) [Search protein sequence]
GAIIPPWIHVPDHSRFFVIKSSSLEHVKKSFYNGIWSSTFYGNKRLSEAY
ESLPQGAKIYLLFSVNASGRFCGVAEMSSNLREDLDTSIWGYRHAFKVRW
IVVRDVHNRSLKQFLIPANDMKPVTNSRDTQEIPATISKSILKLFKYVQS
FLDD
3D structure
PDB4u8t Molecular basis for the recognition of methylated adenines in RNA by the eukaryotic YTH domain.
ChainB
Resolution2.7 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna B K184 S185 S186 H190 W200 S201 T203 Y205 R209 N230 A231 W254 Y260 N276 T293 N294 S295 R296 D297 K20 S21 S22 H26 W36 S37 T39 Y41 R45 N66 A67 W90 Y92 N108 T125 N126 S127 R128 D129 PDBbind-CN: Kd=0.2uM
BS02 rna B F204 Y205 F40 Y41 PDBbind-CN: Kd=0.2uM
Gene Ontology

View graph for
Molecular Function
External links
PDB RCSB:4u8t, PDBe:4u8t, PDBj:4u8t
PDBsum4u8t
PubMed25201973
UniProtC5E1V0

[Back to BioLiP]