Structure of PDB 4tui Chain B

Receptor sequence
>4tuiB (length=306) Species: 243232 (Methanocaldococcus jannaschii DSM 2661) [Search protein sequence]
MMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDL
FNDLRPPVKALRIAMQAFKKLHENNIKVYIVAGNHEMPRRLGEESPLALL
KDYVKILDGKDVINVNGEEIFICGTYYHKKSKREEMLDKLKNFESEAKNY
KKKILMLHQGINPYIPLDYELEHFDLPKFSYYALGHIHKRILERFNDGIL
AYSGSTEIIYRNEYEDYKKEGKGFYLVDFSGNDLDISDIEKIDIECREFV
EVNIKDKKSFNEAVNKIERCKNKPVVFGKIKREFKPWFDTLKDKILINKA
IIVDDE
3D structure
PDB4tui DNA end recognition by the Mre11 nuclease dimer: insights into resection and repair of damaged DNA.
ChainB
Resolution3.59 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.1.-.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B Q15 N17 Q15 N17
BS02 dna B Y16 N17 L18 D19 K129 Y16 N17 L18 D19 K129
Gene Ontology
Molecular Function
GO:0000403 Y-form DNA binding
GO:0003677 DNA binding
GO:0004519 endonuclease activity
GO:0004527 exonuclease activity
GO:0004529 DNA exonuclease activity
GO:0008408 3'-5' exonuclease activity
GO:0016787 hydrolase activity
GO:0030145 manganese ion binding
GO:0042802 identical protein binding
GO:0045027 DNA end binding
GO:0046872 metal ion binding
Biological Process
GO:0006281 DNA repair
GO:0006302 double-strand break repair

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:4tui, PDBe:4tui, PDBj:4tui
PDBsum4tui
PubMed25107472
UniProtQ58719|MRE11_METJA DNA double-strand break repair protein Mre11 (Gene Name=mre11)

[Back to BioLiP]