Structure of PDB 4r8t Chain B

Receptor sequence
>4r8tB (length=141) Species: 11072 (Japanese encephalitis virus) [Search protein sequence]
TTTGVYRIMARGILGTYQAGVGVMYENVFHTLWHTTRGAAIMSGEGKLTP
YWGSVKEDRIAYGGPWRFDRKWNGTDDVQVIVVEPGKAAVNIQTKPGVFK
TPLGEVGAVSLDYPRGTSGSPILDSNGDIIGLYGNGVELGD
3D structure
PDB4r8t Fast native-SAD phasing for routine macromolecular structure determination.
ChainB
Resolution2.133 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.4.21.91: flavivirin.
3.6.1.15: nucleoside-triphosphate phosphatase.
3.6.4.13: RNA helicase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B T20 G21 V22 Y23 R24 I25 M26 A27 R28 F46 I58 M59 Q96 I98 A106 N108 Q110 L140 D141 S142 T3 G4 V5 Y6 R7 I8 M9 A10 R11 F29 I41 M42 Q79 I81 A89 N91 Q93 L123 D124 S125
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003724 RNA helicase activity
GO:0005524 ATP binding

View graph for
Molecular Function
External links
PDB RCSB:4r8t, PDBe:4r8t, PDBj:4r8t
PDBsum4r8t
PubMed25506719
UniProtO90417

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