Structure of PDB 4pdd Chain B

Receptor sequence
>4pddB (length=303) Species: 296591 (Polaromonas sp. JS666) [Search protein sequence]
QTILKIGYTPPKDSHYGVGATTFCDEVEKGTQERYKCQHFPSSALGGERE
MIESVQLGTQDLVNTSTGPLGNFVPETRIVDIPFLFRDYEHARKVMDGAI
GQDLLKKMQAKGLIGLAWTENGFRHMTNSKRPILQASDAAGLKVRTMENK
VHMDGYKTFGLLPTPMAFPELFTALQQGTVDGQENPIPVILSSKFSQVQK
HLSLTGHVYSPAVLILSSRVWDKLSEADKKVFVAAAQKATVAQRKRVNDD
EANGITQLKKDGMQVVEKVDGESFRKAVAPAYAGFAKEFGAERIAAIQAV
KAE
3D structure
PDB4pdd Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes.
ChainB
Resolution1.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 EAX B T40 Y47 E79 N152 R155 R176 M178 F199 N216 T9 Y16 E48 N121 R124 R145 M147 F168 N185
Gene Ontology
Molecular Function
GO:0030246 carbohydrate binding
Biological Process
GO:0055085 transmembrane transport
Cellular Component
GO:0030288 outer membrane-bounded periplasmic space

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Molecular Function
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Cellular Component
External links
PDB RCSB:4pdd, PDBe:4pdd, PDBj:4pdd
PDBsum4pdd
PubMed25540822
UniProtQ12HD7

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