Structure of PDB 4p9d Chain B

Receptor sequence
>4p9dB (length=135) Species: 1137745 (Cyanophage S-TIM5) [Search protein sequence]
MKPEIKEAYMKTAELFSQVSNCKRMKVGAIVVKNGSILAHGWNGTPSGFH
TNCCELEDGSTNPFVLHAEQNALVKMAKSSESIDGSELFCTHSPCPDCSK
MIAQAGVKKVYYRNEYRITDGIDVLQQLGVEVEKM
3D structure
PDB4p9d The First Crystal Structure of a dTTP-bound Deoxycytidylate Deaminase Validates and Details the Allosteric-Inhibitor Binding Site.
ChainB
Resolution2.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN B H67 C95 C98 H67 C95 C98
BS02 TMP B V27 N43 T61 H67 Y116 V27 N43 T61 H67 Y116
BS03 TTP B H40 G41 W42 G44 T45 S47 N52 N71 K75 H40 G41 W42 G44 T45 S47 N52 N71 K75
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0003824 catalytic activity
GO:0004132 dCMP deaminase activity
GO:0008270 zinc ion binding
GO:0016787 hydrolase activity
GO:0046872 metal ion binding
Biological Process
GO:0006220 pyrimidine nucleotide metabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:4p9d, PDBe:4p9d, PDBj:4p9d
PDBsum4p9d
PubMed25404739
UniProtH6WFU3

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